Stem-loop ptr-mir-4742

Accession

MI0020590

Description

Pan troglodytes ptr-mir-4742 precursor miRNA

Sequence

uagaaaaugaagauauuucaUCAGGCAAAGGGAUAUUUACAGAuacuuuuuaaaauuuguuugaguugaggcagaguaaauaucuguauucuccuuugccugcagggaguuca
...........((..((((..(((((((((((.....((((((((...((((...(((((((......))))))).))))))))))))...)))))))))))..))))..)).

Structure

uagaaaaugaa  ua    aU           AUAUU        cuu    aaa       ga 
           ga  uuuc  CAGGCAAAGGG     UACAGAua   uuua   uuuguuu  g
           ||  ||||  |||||||||||     ||||||||   ||||   |||||||   
           cu  aggg  guccguuuccu     augucuau   aaau   agacgga  u
----------a  ug    ac           --cuu        ---    --g       gu 

Annotation confidence Not enough data

Genome context

chr1: 203354433-203354545 [-]

Mature ptr-miR-4742

• Accession: MIMAT0024043
• Description: Pan troglodytes ptr-miR-4742 mature miRNA
• Sequence: 21 - UCAGGCAAAGGGAUAUUUACAGA - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116