Stem-loop ptr-mir-3129

Accession

MI0020588

Description

Pan troglodytes ptr-mir-3129 precursor miRNA

Sequence

aaaaaaaaaguuguacuuggGCAGUAGUGUAGAGAUUGGUuugccuguuaaugaauucaaacuaaucucuacacugcugcccaagaacauccuauauucaacuucuuuau
........((.(((.((((((((((((((((((((((((((((..(........)..)))))))))))))))))))))))))))).)))..)).................

Structure

---------aaaaaaaa  -u   a                            cc guu 
                 ag  ugu cuuggGCAGUAGUGUAGAGAUUGGUuug  u   a
                 ||  ||| ||||||||||||||||||||||||||||  |    
                 uc  aca gaacccgucgucacaucucuaaucaaac  a   a
uauuucuucaacuuaua  cu   a                            uu agu 

Annotation confidence Not enough data

Genome context

chr2B: 79672084-79672193 [-]

Mature ptr-miR-3129

• Accession: MIMAT0024041
• Description: Pan troglodytes ptr-miR-3129 mature miRNA
• Sequence: 21 - GCAGUAGUGUAGAGAUUGGU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116