Stem-loop ptr-mir-1252

Accession

MI0020586

Description

Pan troglodytes ptr-mir-1252 precursor miRNA

Sequence

aaaaaaugugagguguagaaAGAAGGAAGUUGAAUUCAUUuagaaaagagaauuccaaaugagcuuaauuuccuuuuuucuaaaucuuaauaaucuaccuugcuuuucu
.......((((((((((((((((((((((((((.(((((((.(((.......))).))))))).)))))))))))))))))).............))))))))......

Structure

aaaaaau        -------------                  A       a   aa 
       gugaggug             uagaaAGAAGGAAGUUGA UUCAUUu gaa  g
       ||||||||             |||||||||||||||||| ||||||| |||  a
       cguuccau             aucuuuuuuccuuuaauu gaguaaa cuu  g
-ucuuuu        cuaauaauucuaa                  c       c   aa 

Annotation confidence Not enough data

Genome context

chr12: 81830209-81830317 [+]

Mature ptr-miR-1252

• Accession: MIMAT0024039
• Description: Pan troglodytes ptr-miR-1252 mature miRNA
• Sequence: 21 - AGAAGGAAGUUGAAUUCAUU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116