Stem-loop bna-MIR395a

Accession

MI0020283

Description

Brassica napus bna-MIR395a precursor miRNA

Literature search

6 open access papers mention bna-MIR395a
(18 sentences)

Sequence

uccuagaguuccucugagcacuucauuggguauacaauuucuuaugaagauuacccaCUGAAGUGUUUGGGGGAACUCcugga
(((..((((((((((((((((((((.((((((.....((((....))))..)))))).))))))))))))))))))))..)))

Structure

   ua                    u      uacaa    u 
ucc  gaguuccucugagcacuuca ugggua     uuuc u
|||  |||||||||||||||||||| ||||||     ||||  
agg  CUCAAGGGGGUUUGUGAAGU acccau     gaag a
   uc                    C      ---ua    u 

Annotation confidence Not enough data

Genome context

EM:AC189385: 84299-84381 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bna-MIR395a

Mature bna-miR395a

• Accession: MIMAT0023636
• Description: Brassica napus bna-miR395a mature miRNA
• Sequence: 58 - CUGAAGUGUUUGGGGGAACUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823