Stem-loop bna-MIR394b

Accession

MI0020282

Description

Brassica napus bna-MIR394b precursor miRNA

Gene family

MIPF0000100; MIR394

Literature search

4 open access papers mention bna-MIR394b
(81 sentences)

Sequence

uuacagagaucuUUGGCAUUCUGUCCACCUCCccuaccuauguauauguguauuaucuacguuguguuuugugagggggaggugggcauacugccaacagagaucuguuagg
..(((((..(((((((((...(((((((((((((((((.(((((.(((.....))).))))).).)).......))))))))))))))...)))))).)))..)))))....

Structure

--uu     ga   -      UUC              -------  - u     u   u 
    acaga  ucu UUGGCA   UGUCCACCUCCccu       ac c augua aug g
    |||||  ||| ||||||   ||||||||||||||       || | ||||| ||| u
    ugucu  aga aaccgu   acggguggaggggg       ug g ugcau uau a
ggau     ag   c      cau              aguguuu  u u     c   u 

Annotation confidence Not enough data

Genome context

EM:AC189295: 85927-86038 [+]

Mature bna-miR394b

• Accession: MIMAT0023635
• Description: Brassica napus bna-miR394b mature miRNA
• Sequence: 13 - UUGGCAUUCUGUCCACCUCC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823