Stem-loop bna-MIR172d

Accession

MI0020277

Description

Brassica napus bna-MIR172d precursor miRNA

Literature search

12 open access papers mention bna-MIR172d
(46 sentences)

Sequence

uuuuugcuauugcaucaucaucaagauucagaaaucauauuccuugauggguucuccuucgagccugucuuuuuugguuugAGAAUCUUGAUGAUGCUGCAGcggcgauuaaa
...(((((.(((((.((((((((((((((..((((((........(((((((((......))))))))).....))))))..)))))))))))))).))))).))))).....

Structure

--uuu     a     u              ag      uauuccuu         uc 
     uugcu uugca caucaucaagauuc  aaauca        gauggguuc  c
     ||||| ||||| ||||||||||||||  ||||||        |||||||||   
     agcgg GACGU GUAGUAGUUCUAAG  uuuggu        cuguccgag  u
aaauu     c     C              Ag      ---uuuuu         cu 

Annotation confidence Not enough data

Genome context

EM:AC189487: 133692-133804 [+]

Mature bna-miR172d

• Accession: MIMAT0023630
• Description: Brassica napus bna-miR172d mature miRNA
• Sequence: 82 - AGAAUCUUGAUGAUGCUGCAG - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823