Stem-loop bna-MIR166f

Accession

MI0020272

Description

Brassica napus bna-MIR166f precursor miRNA

Literature search

9 open access papers mention bna-MIR166f
(33 sentences)

Sequence

aguugaggggaauguugucuggaucgaggauauuauauauacacaaauacguauauauguuaauacaaguguuugaucauauauguauauagauuauucUCGGACCAGGCUUCAUCCCCCcuaacaugu
.((((.((((.(((..((((((.(((((((((...(((((((((((((((((((........))))..)))))))........))))))))...))))))))).))))))..))).)))).))))....

Structure

---a    a    a   uu      a         uua        --------       --    aua 
    guug gggg aug  gucugg ucgaggaua   uauauaca        caaauac  guau   u
    |||| |||| |||  |||||| |||||||||   ||||||||        |||||||  ||||    
    caau CCCC UAC  CGGACC GGCUcuuau   auauaugu        guuugug  caua   g
ugua    c    C   UU      A         uag        auauacua       aa    auu 

Annotation confidence Not enough data

Genome context

EM:BH938609: 442-570 [+]

Mature bna-miR166f

• Accession: MIMAT0023625
• Description: Brassica napus bna-miR166f mature miRNA
• Sequence: 100 - UCGGACCAGGCUUCAUCCCCC - 120
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823