Stem-loop bna-MIR156e

Accession

MI0020261

Description

Brassica napus bna-MIR156e precursor miRNA

Literature search

13 open access papers mention bna-MIR156e
(209 sentences)

Sequence

gaaaugcaacagagaaaacUGACAGAAGAGAGUGAGCACuugcaaggcacuguuaugugucaauaacuuugcgugugcgugcucaccucucuuucugucaguugccugacuucucgcuu
...........((((((((((((((((((((((((((((.((((..(((..(((((......)))))..))).)))).))))))).))))).))))))))))).......)))))....

Structure

gaaaugcaaca     -------           -     -       u    ag   cu     gu 
           gagaa       aacUGACAGAA GAGAG UGAGCAC ugca  gca  guuau  g
           |||||       ||||||||||| ||||| ||||||| ||||  |||  |||||   
           cucuu       uugacugucuu cucuc acucgug gugu  cgu  caaua  u
-------uucg     caguccg           u     c       c    -g   uu     ac 

Annotation confidence Not enough data

Genome context

EM:AC189375: 124714-124832 [+]

Mature bna-miR156e

• Accession: MIMAT0023614
• Description: Brassica napus bna-miR156e mature miRNA
• Sequence: 20 - UGACAGAAGAGAGUGAGCAC - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823