Stem-loop dpr-MIR397

Accession

MI0020208

Description

Digitalis purpurea dpr-MIR397 precursor miRNA

Literature search

1 open access papers mention dpr-MIR397
(3 sentences)

Sequence

uuaaaaacgCCAUUGAGUGCAGCGUUGAUGauauugcauuuguucgaucucuuuaguccugauuuaucgauuguuauaucgucaaugcugcacuuaauaacguuuuuaa
.((((((((..(((((((((((((((((((((((.(((.(((...((((...........))))...))).))).)))))))))))))))))))))))..)))))))).

Structure

u        CC                       u   u   uuc    ucuu 
 uaaaaacg  AUUGAGUGCAGCGUUGAUGauau gca uug   gauc    u
 ||||||||  ||||||||||||||||||||||| ||| |||   ||||    a
 auuuuugc  uaauucacgucguaacugcuaua ugu agc   uuag    g
a        aa                       u   u   uau    uccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature dpr-miR397

• Accession: MIMAT0023537
• Description: Digitalis purpurea dpr-miR397 mature miRNA
• Sequence: 10 - CCAUUGAGUGCAGCGUUGAUG - 30
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 22233149
   Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea
   Wu B, Li Y, Yan H, Ma Y, Luo H, Yuan L, Chen S, Lu S
   BMC Genomics (2012) 13:15