Stem-loop dpr-MIR167b

Accession

MI0020203

Description

Digitalis purpurea dpr-MIR167b precursor miRNA

Literature search

1 open access papers mention dpr-MIR167b
(3 sentences)

Sequence

ucuagaaaggaacaagUGAAGCUGCCAGCAUGAUCUAucuugggaugguuuuggauaugagaguacuaacccuagcuaggucaugcuguagcagcaucacuucuuccucuuuggg
.(((((.(((((.((((((.(((((((((((((((((.((.(((.(((((((........))).)))).))).)).))))))))))))..))))).)))))).))))).))))).

Structure

u     a     c      A     --            u  u   a    -   gga 
 cuaga aggaa aagUGA GCUGC  CAGCAUGAUCUA cu ggg uggu uuu   u
 ||||| ||||| |||||| |||||  |||||||||||| || ||| |||| |||    
 gguuu uccuu uucacu cgacg  gucguacuggau ga ccc auca gag   a
g     c     c      a     au            c  u   a    u   agu 

Annotation confidence Not enough data

Genome context

Unknown

Mature dpr-miR167b

• Accession: MIMAT0023532
• Description: Digitalis purpurea dpr-miR167b mature miRNA
• Sequence: 17 - UGAAGCUGCCAGCAUGAUCUA - 37
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 22233149
   Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea
   Wu B, Li Y, Yan H, Ma Y, Luo H, Yuan L, Chen S, Lu S
   BMC Genomics (2012) 13:15