Stem-loop hhv6b-mir-Ro6-2

Accession

MI0020180

Description

Human herpesvirus 6B hhv6b-mir-Ro6-2 precursor miRNA

Sequence

cggcgacagcCGCCGCCGCCGUUACUGUCACUguucaaagaacguggccgUUACAGUUUCCGCUGCCGCUGUggucgccgc
(((((((.((.((.((.((.(..((((((((.((((...)))))))......)))))..).)).)).)).)).))))))).

Structure

-       a  C  C  C  C UU     ------   U    a 
 cggcgac gc GC GC GC G  ACUGU      CAC guuc  
 ||||||| || || || || |  |||||      ||| |||| a
 gccgcug UG CG CG CG C  UGACA      gug caag  
c       g  U  C  U  C UU     UUgccg   -    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hhv6b-miR-Ro6-2-5p

• Accession: MIMAT0026458
• Description: Human herpesvirus 6B hhv6b-miR-Ro6-2-5p mature miRNA
• Sequence: 11 - CGCCGCCGCCGUUACUGUCACU - 32
• Evidence: experimental ; cloned [1]

Mature hhv6b-miR-Ro6-2-3p

• Accession: MIMAT0026459
• Description: Human herpesvirus 6B hhv6b-miR-Ro6-2-3p mature miRNA
• Sequence: 51 - UUACAGUUUCCGCUGCCGCUGU - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 22114334
   Small RNA deep sequencing identifies microRNAs and other small noncoding RNAs from human herpesvirus 6B
   "Tuddenham L, Jung JS, Chane-Woon-Ming B, Dolken L, Pfeffer S"
   "J Virol (2012) 86:1638-1649