Stem-loop hco-mir-5967

Accession

MI0020142

Description

Haemonchus contortus hco-mir-5967 precursor miRNA

Sequence

caugcgaaccaagaauaacagcaggaugacuguaucucgaaaucuguaguacauggaUUUCGUGAUACCGUUAUCCGGCuguuacuacuaauuaacuacua
...............(((((((.(((((((.(((((.((((((((((.....)))))))))).))))).))))))).))))))).................

Structure

--caugcgaaccaagaa       a       u     u          a 
                 uaacagc ggaugac guauc cgaaaucugu g
                 ||||||| ||||||| ||||| |||||||||| u
                 auuguCG CCUAUUG CAUAG GCUUUaggua a
aucaucaauuaaucauc       G       C     U          c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5967

• Accession: MIMAT0023474
• Description: Haemonchus contortus hco-miR-5967 mature miRNA
• Sequence: 58 - UUUCGUGAUACCGUUAUCCGGC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4