Stem-loop hco-mir-5955

Accession

MI0020126

Description

Haemonchus contortus hco-mir-5955 precursor miRNA

Sequence

auuuggguuuUGACAAGACUCCAAGGACUGGUCAgaaucccguagguccgaccagucguugagguugugucgaaaccuaaauu
(((((((((((((((.((((.(((.((((((((.((..((....)))).)))))))).))).)))).))))))))))))))).

Structure

-               A    C   G        A  au  c 
 auuuggguuuUGACA GACU CAA GACUGGUC ga  cc g
 ||||||||||||||| |||| ||| |||||||| ||  ||  
 uaaauccaaagcugu uugg guu cugaccag cu  gg u
u               g    a   g        c  --  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5955

• Accession: MIMAT0023458
• Description: Haemonchus contortus hco-miR-5955 mature miRNA
• Sequence: 11 - UGACAAGACUCCAAGGACUGGUCA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4