Stem-loop hco-mir-5951

Accession

MI0020121

Description

Haemonchus contortus hco-mir-5951 precursor miRNA

Sequence

guagaugaccuucuccauugcccuccgggaugcaguaacGGUUCCGUCAGGACGACGAAGGAAggucaucuug
..((((((((((((...(((.(((.((((((.........))))))..))).)))....))))))))))))..

Structure

gu            -cca   c   -c      gca 
  agaugaccuucu    uug ccu  cgggau   g
  ||||||||||||    ||| |||  ||||||   u
  ucuacuggAAGG    AGC GGA  GCCUUG   a
gu            AAGC   A   CU      Gca 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5951

• Accession: MIMAT0023453
• Description: Haemonchus contortus hco-miR-5951 mature miRNA
• Sequence: 40 - GGUUCCGUCAGGACGACGAAGGAA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4