Accession
MI0019653
Description
Sarcophilus harrisii
sha-mir-200c precursor miRNA
Sequence
cccgggccugccucccucgggcucuccuggcccggccucgggcaggugggacgggugccccaucuuacccagcaguguuugggugcugcuuggacgucucUAAUACUGCCGGGUAACGAuggagcuccuuuccuugugacgccuccuaug
.....((((((((...(((((((.....)))))))....))))))))((((.(((.((.(((((((((((.((((((((.(((((((....)).)).))).)))))))).)))))).))))).)).))).))))................
.....((((((((...(((((((.....)))))))....))))))))((((.(((.((.(((((((((((.((((((((.(((((((....)).)).))).)))))))).)))))).))))).)).))).))))................
Structure
cccgggccugccucccucgggcucuccuggcccggccucgggcaggu c u c - a u - - g
ggga ggg gc ccauc uuaccc gcaguguu ggg ug cu c
|||| ||| || ||||| |||||| |||||||| ||| || ||
uccu ucc cg gguAG AAUGGG CGUCAUAA cuc gc gg u
-------------------------------guauccuccgcagugu u u a C C U u a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL861612.1: 2158021-2158170 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sha-mir-200c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-200c
| Accession | MIMAT0022825 |
| Description | Sarcophilus harrisii sha-miR-200c mature miRNA |
| Sequence | 101 - UAAUACUGCCGGGUAACGA - 119 |
| Evidence |
experimental
Illumina [1] |
References
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