Stem-loop vun-MIR160

Accession

MI0019568

Description

Vigna unguiculata vun-MIR160 precursor miRNA

Literature search

2 open access papers mention vun-MIR160
(2 sentences)

Sequence

uguuaacaugcuuggcgUGCCUGGCUCCCUGUAUGCCAuuugcagagcccaucagaacagugauggcuuuaacuaauggcgugcgaggagucaugcauguuguuaguuauuaguuaa
..(((((..(((.(((((((.(((((((.(((((((((((...((((((.((((......))))))))))....))))))))))).))))))).)))))))...))).....)))))

Structure

ug     ---au   --u       C       C           -ugc      c    ga 
  uuaac     gcu   ggcgUGC UGGCUCC UGUAUGCCAuu    agagcc auca  a
  |||||     |||   ||||||| ||||||| |||||||||||    |||||| ||||   
  aauug     uga   uuguacg acugagg gcgugcgguaa    uuucgg uagu  c
--     auuau   uug       u       a           ucaa      -    ga 

Annotation confidence Low

Genome context

Unknown

Mature vun-miR160

• Accession: MIMAT0022755
• Description: Vigna unguiculata vun-miR160 mature miRNA
• Sequence: 18 - UGCCUGGCUCCCUGUAUGCCA - 38
• Evidence: experimental ; cloned [1]

References

1. Identification and validation of conserved microRNAs along with their differential expression in roots of Vigna unguiculata grown under salt stress
   "Paul S, Kundu A, Pal A"
   "Plant Cell Tissue Organ Culture. (2011) 105:233-242