miRBase entry: tur-mir-263a

Stem-loop tur-mir-263a


Accession
MI0019408
Description
Tetranychus urticae tur-mir-263a precursor miRNA


Sequence

aucuguuucucucUAUGGCACUGGAAGAAUUCACGgggacucaauguuauuccgUGGUUUCUCUAGUGCUGUGAagagcagcgggc
.((((((.((((.((((((((((((.(((.((((((((((.....)))..))))))).))))))))))))))).)))).)))))).

Structure
a      u    c            A   U       --   u 
 ucuguu cucu UAUGGCACUGGA GAA UCACGgg  gac c
 |||||| |||| |||||||||||| ||| |||||||  ||| a
 gggcga gaga GUGUCGUGAUCU CUU GGUgccu  uug a
c      c    A            -   U       ua   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tur-miR-263a-5p

Accession MIMAT0023112
Description Tetranychus urticae tur-miR-263a-5p mature miRNA
Sequence 14 - UAUGGCACUGGAAGAAUUCACG - 35
Evidence experimental
Illumina [1]

Mature tur-miR-263a-3p

Accession MIMAT0023113
Description Tetranychus urticae tur-miR-263a-3p mature miRNA
Sequence 55 - UGGUUUCUCUAGUGCUGUGA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22113690
    The genome of Tetranychus urticae reveals herbivorous pest adaptations
    "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
    "Nature (2011) 479:487-492