Stem-loop tur-mir-2-2

Accession

MI0019406

Description

Tetranychus urticae tur-mir-2-2 precursor miRNA

Literature search

1 open access papers mention tur-mir-2-2
(6 sentences)

Sequence

agcauuccuccgagUCGUCAAAGGGGUUGUGAAAUGuucauuguaagcaaauccaUAUCACAGCCAGCUUUGAUGAUUuugauaaaaugc
.(((((..((.((((((((((((.((((((((.(((....(((....)))...))).))))))))..)))))))))))).))...)))))

Structure

a     -cc  c            -G        A   uuca   u 
 gcauu   uc gagUCGUCAAAG  GGUUGUGA AUG    uug a
 |||||   || ||||||||||||  |||||||| |||    |||  
 cguaa   ag uUUAGUAGUUUC  CCGACACU Uac    aac a
-     aau  u            GA        A   -cua   g 

Annotation confidence Low

Genome context

Unknown

Mature tur-miR-2-5p

• Accession: MIMAT0023042
• Description: Tetranychus urticae tur-miR-2-5p mature miRNA
• Sequence: 15 - UCGUCAAAGGGGUUGUGAAAUG - 36
• Evidence: experimental ; Illumina [1]

Mature tur-miR-2-3p

• Accession: MIMAT0023043
• Description: Tetranychus urticae tur-miR-2-3p mature miRNA
• Sequence: 56 - UAUCACAGCCAGCUUUGAUGAUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492