Stem-loop tur-mir-5738

Accession

MI0019405

Description

Tetranychus urticae tur-mir-5738 precursor miRNA

Sequence

gcauaaaaugagccaccccauggugcucccAAUGUAAUGAUAGCAAAAACuuuguaauugauuauaaucaagUUUUCUCUAUCAUUACCUUGGgagcaccauggggugacucauuuuaugc
((((((((((((.(((((((((((((((((((.((((((((((..((((((((((((....)))))...)))))))..)))))))))).))))))))))))))))))).))))))))))))

Structure

            c                   U          CA       ---     u 
gcauaaaaugag caccccauggugcucccAA GUAAUGAUAG  AAAACuu   uguaa u
|||||||||||| ||||||||||||||||||| ||||||||||  |||||||   |||||  
cguauuuuacuc gugggguaccacgagGGUU CAUUACUAUC  UUUUgaa   auauu g
            a                   C          UC       cua     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-5738-5p

• Accession: MIMAT0023110
• Description: Tetranychus urticae tur-miR-5738-5p mature miRNA
• Sequence: 31 - AAUGUAAUGAUAGCAAAAAC - 50
• Evidence: experimental ; Illumina [1]

Mature tur-miR-5738-3p

• Accession: MIMAT0023111
• Description: Tetranychus urticae tur-miR-5738-3p mature miRNA
• Sequence: 73 - UUUUCUCUAUCAUUACCUUGG - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492