miRBase entry: tur-mir-263b

Stem-loop tur-mir-263b


Accession
MI0019404
Description
Tetranychus urticae tur-mir-263b precursor miRNA


Sequence

cguaaucuucaaccaaucugaaccuuuaucCUUGGCACUGGAAGAAUUCACCGuugauuaguuaaaaaacucGUGGGUUCUUGGGUGCCAAAGAcuaaggauaagaauucaagauuaua
.((((((((.......(((...((((..((.((((((((..((((((((((.(((............)))..)))))))))).)))))))).))..))))...)))....)))))))).

Structure
c        caaccaa   gaa    ua  C        GG          -C   gauua 
 guaaucuu       ucu   ccuu  uc UUGGCACU  AAGAAUUCAC  Guu     g
 ||||||||       |||   ||||  || ||||||||  ||||||||||  |||      
 uauuagaa       aga   ggaa  AG AACCGUGG  UUCUUGGGUG  caa     u
a        ---cuua   aua    uc  A        -G          cu   aaaau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tur-miR-263b-5p

Accession MIMAT0023108
Description Tetranychus urticae tur-miR-263b-5p mature miRNA
Sequence 31 - CUUGGCACUGGAAGAAUUCACCG - 53
Evidence experimental
Illumina [1]

Mature tur-miR-263b-3p

Accession MIMAT0023109
Description Tetranychus urticae tur-miR-263b-3p mature miRNA
Sequence 73 - GUGGGUUCUUGGGUGCCAAAGA - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22113690
    The genome of Tetranychus urticae reveals herbivorous pest adaptations
    "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
    "Nature (2011) 479:487-492