Stem-loop tur-mir-5735

Accession

MI0019394

Description

Tetranychus urticae tur-mir-5735 precursor miRNA

Sequence

uuugcuguugauugugaauuguucACCUUUCUCUUGUUGUCCACUGcucaugcaagcaacagUGGACAACAGGAUAAUGGCGUucaauaagcaaaccacucggccuguaac
.((((.(((((((((..((((..(.((.((.(((((((((((((((((......)))...)))))))))))))).)).)).)..))))..)))).....)))))..)))).

Structure

u    -u     -----    ga    uu A  U  C              ---   ca 
 uugc  guuga     uugu  auug  c CC UU UCUUGUUGUCCACU   Gcu  u
 ||||  |||||     ||||  ||||  | || || ||||||||||||||   |||   
 aaug  cggcu     aacg  uaac  G GG AA AGGACAACAGGUga   cga  g
c    uc     cacca    aa    uU C  U  U              caa   ac 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-5735-5p

• Accession: MIMAT0023092
• Description: Tetranychus urticae tur-miR-5735-5p mature miRNA
• Sequence: 25 - ACCUUUCUCUUGUUGUCCACUG - 46
• Evidence: experimental ; Illumina [1]

Mature tur-miR-5735-3p

• Accession: MIMAT0023093
• Description: Tetranychus urticae tur-miR-5735-3p mature miRNA
• Sequence: 63 - UGGACAACAGGAUAAUGGCGU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492