Stem-loop tur-mir-9-2

Accession

MI0019390

Description

Tetranychus urticae tur-mir-9-2 precursor miRNA

Literature search

1 open access papers mention tur-mir-9-2
(1 sentences)

Sequence

cucguugcugauuuccucaUCUUUGGUUAUUUAGCUUUCUGAuugcccguacaaacaucAUAAAGCUAUUUAACCAAAUUUGaggacccagcuugac
.(((..((((...((((((..((((((((..(((((((.((((((......))...)))).)))))))..))))))))..))))))..)))).))).

Structure

c   uu    auu      UC        UU       C    ---  cc 
 ucg  gcug   uccuca  UUUGGUUA  UAGCUUU UGAu   ug  c
 |||  ||||   ||||||  ||||||||  ||||||| ||||   ||   
 agu  cgac   aggaGU  AAACCAAU  AUCGAAA Acua   ac  g
c   -u    -cc      UU        UU       U    caa  au 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-9-5p

• Accession: MIMAT0023082
• Description: Tetranychus urticae tur-miR-9-5p mature miRNA
• Sequence: 20 - UCUUUGGUUAUUUAGCUUUCUGA - 42
• Evidence: experimental ; Illumina [1]

Mature tur-miR-9-3p

• Accession: MIMAT0023083
• Description: Tetranychus urticae tur-miR-9-3p mature miRNA
• Sequence: 60 - AUAAAGCUAUUUAACCAAAUUUG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492