Stem-loop tur-mir-252

Accession

MI0019384

Description

Tetranychus urticae tur-mir-252 precursor miRNA

Gene family

MIPF0000285; mir-252

Sequence

accaccaccuuccuguuCUAAGUACUAGCGCCGCAGGAGuguuuacaucucuuuugguauauuaaauucacUCCUGCAGCCUUGGUGCUUACUaugggacggugcagg
.((..((((.((((((..((((((((((.((.(((((((((((((.(((......)))....))))..))))))))).)).))))))))))..)))))).))))..))

Structure

a  ac    u      uC          C  C         --    ---c   uc 
 cc  cacc uccugu  UAAGUACUAG GC GCAGGAGug  uuua    auc  u
 ||  |||| ||||||  |||||||||| || |||||||||  ||||    |||   
 gg  gugg agggua  AUUCGUGGUU CG CGUCCUcac  aaau    ugg  u
-  ac    c      UC          C  A         uu    uaua   uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-252-5p

• Accession: MIMAT0023076
• Description: Tetranychus urticae tur-miR-252-5p mature miRNA
• Sequence: 18 - CUAAGUACUAGCGCCGCAGGAG - 39
• Evidence: experimental ; Illumina [1]

Mature tur-miR-252-3p

• Accession: MIMAT0023077
• Description: Tetranychus urticae tur-miR-252-3p mature miRNA
• Sequence: 72 - UCCUGCAGCCUUGGUGCUUACU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492