Stem-loop tur-mir-5734

Accession

MI0019383

Description

Tetranychus urticae tur-mir-5734 precursor miRNA

Sequence

gaauugaagaugcuucagauuGCAUUGACUUCUAUCCGAAUGuauccccuaugaaaaucaUUGGGGUAGAAGUCAGUAUAAucuaaaguuaucaauua
.((((((....((((.((((((.((((((((((((((.((((................)))).)))))))))))))).)))))).))))..)))))).

Structure

g      agau    c      C              G    uaucccc 
 aauuga    gcuu agauuG AUUGACUUCUAUCC AAUG       u
 ||||||    |||| |||||| |||||||||||||| ||||        
 uuaacu    ugaa ucuAAU UGACUGAAGAUGGG UUac       a
a      --au    a      A              G    uaaaagu 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-5734-5p

• Accession: MIMAT0023074
• Description: Tetranychus urticae tur-miR-5734-5p mature miRNA
• Sequence: 22 - GCAUUGACUUCUAUCCGAAUG - 42
• Evidence: experimental ; Illumina [1]

Mature tur-miR-5734-3p

• Accession: MIMAT0023075
• Description: Tetranychus urticae tur-miR-5734-3p mature miRNA
• Sequence: 61 - UUGGGGUAGAAGUCAGUAUAA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492