Stem-loop tur-mir-307

Accession

MI0019379

Description

Tetranychus urticae tur-mir-307 precursor miRNA

Sequence

agaucuucaaaaagccuuCCUCACUCAAUCGGGUGGUGGUGugagagcaguuucgagcuuuuacuaauuucaUCACAACCUCCUUGAGUGAGUGAggcuuucaauucaauca
..........((((((((.(((((((((..((((.(((((((((((((........)))))))).......))))).))))..))))))))).))))))))...........

Structure

-agaucuucaa        C         UC    G     -------        agu 
           aaagccuu CUCACUCAA  GGGU GUGGU       Gugagagc   u
           |||||||| |||||||||  |||| |||||       ||||||||    
           uuucggAG GAGUGAGUU  UCCA CACUa       cauuuucg   u
acuaacuuaac        U         CC    A     cuuuaau        agc 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-307-5p

• Accession: MIMAT0023068
• Description: Tetranychus urticae tur-miR-307-5p mature miRNA
• Sequence: 19 - CCUCACUCAAUCGGGUGGUGGUG - 41
• Evidence: experimental ; Illumina [1]

Mature tur-miR-307-3p

• Accession: MIMAT0023069
• Description: Tetranychus urticae tur-miR-307-3p mature miRNA
• Sequence: 73 - UCACAACCUCCUUGAGUGAGUGA - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492