Stem-loop tur-mir-5733

Accession

MI0019377

Description

Tetranychus urticae tur-mir-5733 precursor miRNA

Sequence

agacuuucgaauguaCACUUGAUUGGACACAGUUUAGuugcgaauacagcugcuugcgcgccuAGGCUGUGUCCUAUUAAGUGUAcauucgaaaguca
.((((((((((((((((((((((.(((((((((((((.((((..............)))).))))))))))))).)))))))))))))))))))))).

Structure

a                      U             u    aauaca 
 gacuuucgaauguaCACUUGAU GGACACAGUUUAG ugcg      g
 |||||||||||||||||||||| ||||||||||||| ||||       
 cugaaagcuuacAUGUGAAUUA CCUGUGUCGGAuc gcgc      c
a                      U             c    guucgu 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-5733-5p

• Accession: MIMAT0023064
• Description: Tetranychus urticae tur-miR-5733-5p mature miRNA
• Sequence: 16 - CACUUGAUUGGACACAGUUUAG - 37
• Evidence: experimental ; Illumina [1]

Mature tur-miR-5733-3p

• Accession: MIMAT0023065
• Description: Tetranychus urticae tur-miR-5733-3p mature miRNA
• Sequence: 64 - AGGCUGUGUCCUAUUAAGUGUA - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492