Stem-loop tur-mir-71-1

Accession

MI0019365

Description

Tetranychus urticae tur-mir-71-1 precursor miRNA

Sequence

cguuugauuuuuuggugUGAAAGACAUGGGUAGUGAGAUGuaacaaauuguaauuaauuuaacuaacaUCUCACUACUUUGUCUUUGGCGcuaauucaaaca
.((((((....(((((((.(((((((.((((((((((((((...((((((....)))))).....))))))))))))))))))))).))))))).)))))).

Structure

c      uuuu       G       U              --aac      u 
 guuuga    uuggugU AAAGACA GGGUAGUGAGAUGu     aaauug a
 ||||||    ||||||| ||||||| ||||||||||||||     ||||||  
 caaacu    aaucGCG UUUCUGU UUCAUCACUCUaca     uuuaau a
a      ---u       G       -              aucaa      u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-71-5p

• Accession: MIMAT0023040
• Description: Tetranychus urticae tur-miR-71-5p mature miRNA
• Sequence: 18 - UGAAAGACAUGGGUAGUGAGAUG - 40
• Evidence: experimental ; Illumina [1]

Mature tur-miR-71-3p

• Accession: MIMAT0023041
• Description: Tetranychus urticae tur-miR-71-3p mature miRNA
• Sequence: 69 - UCUCACUACUUUGUCUUUGGCG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492