Stem-loop tur-mir-7

Accession

MI0019363

Description

Tetranychus urticae tur-mir-7 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

aucuccuugUGGAAGACUAGUGAUUUUGUUGUUugucuguuaguaauuaaACAAGAAAUCGCUAGCUUCCGAuggagaa
.(((((...((((((.(((((((((((.(((((((............))))))))))))))))))))))))..))))).

Structure

a     uug      A           G       ucugu 
 ucucc   UGGAAG CUAGUGAUUUU UUGUUug     u
 |||||   |||||| ||||||||||| |||||||      
 agagg   GCCUUC GAUCGCUAAAG AACAaau     a
a     -uA      -           -       uaaug 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-7-5p

• Accession: MIMAT0023036
• Description: Tetranychus urticae tur-miR-7-5p mature miRNA
• Sequence: 10 - UGGAAGACUAGUGAUUUUGUUGUU - 33
• Evidence: experimental ; Illumina [1]

Mature tur-miR-7-3p

• Accession: MIMAT0023037
• Description: Tetranychus urticae tur-miR-7-3p mature miRNA
• Sequence: 51 - ACAAGAAAUCGCUAGCUUCCGA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492