Stem-loop ssl-MIR948

Accession

MI0019356

Description

Salvia sclarea ssl-MIR948 precursor miRNA

Sequence

UGUGGCUGUGUGGGUUCCGGuucggaaucggacgauucuucuucuucuucuucuucgccggauuccgauugggguuccaccggcuucaca
((.(((((.(((((.(((.(.((((((((((.(((...................))))).)))))))).).))).)))))))))).))..

Structure

--  U     U     U   G u        -  a   uucuucuu 
  UG GGCUG GUGGG UCC G ucggaauc gg cga        c
  || ||||| ||||| ||| | |||||||| || |||        u
  ac ucggc caccu ggg u agccuuag cc gcu        u
ac  u     -     u   g u        g  -   ucuucuuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssl-miR948

• Accession: MIMAT0022522
• Description: Salvia sclarea ssl-miR948 mature miRNA
• Sequence: 1 - UGUGGCUGUGUGGGUUCCGG - 20
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19840835
   One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
   "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
   "Gene (2010) 450:55-62