Stem-loop ssl-MIR166a

Accession

MI0019343

Description

Salvia sclarea ssl-MIR166a precursor miRNA

Sequence

uagaaauggaggcuguuccaagaucgauccuuucuugaauuaauuccaugcauauauauaugugaugugaugaugaaagaugaucuaucUCGGACCAGGCUUCAUUCCUC
.((.(((((((.(((.(((.((((.((((...((((..((((..(((((.(((((....)))))))).))))))..)))).)))).)))).))).))).))))))).)).

Structure

u  a       g   u   a    c    cuu    ga    au  -   g     a 
 ag aauggag cug ucc agau gauc   ucuu  auua  uc cau cauau u
 || ||||||| ||| ||| |||| ||||   ||||  ||||  || ||| |||||  
 UC UUACUUC GAC AGG Ucua cuag   agaa  uagu  ag gua gugua a
C  C       G   C   C    u    --u    ag    --  u   -     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssl-miR166a

• Accession: MIMAT0022509
• Description: Salvia sclarea ssl-miR166a mature miRNA
• Sequence: 90 - UCGGACCAGGCUUCAUUCCUC - 110
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19840835
   One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
   "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
   "Gene (2010) 450:55-62