Stem-loop gma-MIR4401b

Accession

MI0019273

Description

Glycine max gma-MIR4401b precursor miRNA

Sequence

7840 reads, 23.0 reads per million, 172 experiments

ugagcaacuuUCAAAGACGUUGCUGAGGUAAgcaccgucuuaguaagcugcugacauucaaagaugguguuuuccUCAGCACCGUCUUUGAAAuuugcucac
(((((((.(((((((((((.((((((((.((((((((((((((((...)))))........))))))))))).)))))))).))))))))))).))))))).

Structure

-       c           U        U           --------     a 
 ugagcaa uuUCAAAGACG UGCUGAGG AAgcaccgucu        uagua  
 ||||||| ||||||||||| |||||||| |||||||||||        ||||| g
 acucguu AAAGUUUCUGC ACGACUcc uuugugguaga        gucgu  
c       u           C        u           aacuuaca     c 

Annotation confidence Low

Genome context

chr10: 14391631-14391732 [+]

Mature gma-miR4401b-5p

• Accession: MIMAT0022461
• Description: Glycine max gma-miR4401b-5p mature miRNA
• Sequence: 11 - UCAAAGACGUUGCUGAGGUAA - 31
• Evidence: experimental ; Illumina [1], RT-PCR [1]

Mature gma-miR4401b-3p

• Accession: MIMAT0054273
• Description: Glycine max gma-miR4401b-3p mature miRNA
• Sequence: 76 - UCAGCACCGUCUUUGAAA - 93
• Evidence: experimental ; unknown

References

1. PubMed ID: 21219599
   Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing
   Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS
   BMC Plant Biol (2011) 11:5