Accession
MI0019096
Description
Sorghum bicolor
sbi-MIR5564a precursor miRNA
Sequence
1823943
reads,
39398.0
reads per million, 50 experiments
ugccgUGGGGAAGCAAUUCGUCGAACAgcugcugcgccagagguuggcaggcccugagccucguccacgugcacgcgagcuguUCGGCGACUUGCUUCACCCAUGUc
...(((((((((((((.((((((((((((((((((((.....((.(((((((.....)))).))).))))))).)).))))))))))))).))))))).))))))..
...(((((((((((((.((((((((((((((((((((.....((.(((((((.....)))).))).))))))).)).))))))))))))).))))))).))))))..
Structure
ugc - U - - cagag u - c cgUGGG GAAGCAA UCGUCGAACAgcu gc ugcgc gu ggc aggc c |||||| ||||||| ||||||||||||| || ||||| || ||| |||| u GUACCC CUUCGUU AGCGGCUugucga cg acgug ca cug uccg g -cU A C g c ----- c c a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr5: 69707567-69707673 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sbi-MIR5564a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sbi-miR5564a-5p
| Accession | MIMAT0022241 |
| Description | Sorghum bicolor sbi-miR5564a-5p mature miRNA |
| Sequence | 6 - UGGGGAAGCAAUUCGUCGAACA - 27 |
| Evidence |
experimental
454 [1] |
Mature sbi-miR5564a-3p
| Accession | MIMAT0056459 |
| Description | Sorghum bicolor sbi-miR5564a-3p mature miRNA |
| Sequence | 84 - UCGGCGACUUGCUUCACCCAUGU - 106 |
| Evidence |
experimental
unknown |
References
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