Accession
MI0018996
Description
Phaeodactylum tricornutum
pti-MIR5478 precursor miRNA
Sequence
agaaagaguccgaacgacagauuucuauuguacaguacggcgcgaaacgguaccgauccggcgugccgacuggauuaggaagaauagguagguagguauacggacugugacuguagaaugcaagcaucuauucccagaucgugagugcuacacaacguuucuaccguauucgccaaccgaccgaacuggguaccuuauucGACAAAGGAAUCGAUCGUAUCGgggaggaaau
........(((((((((..(((((((.((((.((((.(((((((...(((.......))).))))))))))).........((((((((.(((.(((((((((...(.((((((((...((..((((((......)))).))..)).)))))....))).)..))))))..))).))).(((......)))))).))))).)))))))))))..)))).)))))........
........(((((((((..(((((((.((((.((((.(((((((...(((.......))).))))))))))).........((((((((.(((.(((((((((...(.((((((((...((..((((((......)))).))..)).)))))....))).)..))))))..))).))).(((......)))))).))))).)))))))))))..)))).)))))........
Structure
agaaagag - ca a acaguacggcgcgaaacgguaccgauccggcgugccgacuggauuaggaa - ------------a a -- acu u ---- aau aa - au
uccga acga gauuucu uugu gaaua ggu ggu ggu auacgg g gac uguag gc gc aucu u
||||| |||| ||||||| |||| ||||| ||| ||| ||| |||||| | ||| ||||| || || ||||
ggGCU UGCU CUAAGGA AACA cuuau cca cca ccg uaugcc c uug acauc ug ug uaga c
uaaaggag A AG - -------------------------------------------------G u ugggucaagccag a cu -au u caac --g ag c cc
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
CM000625.1: 97534-97765 [+]
Database links
Mature pti-miR5478
| Accession | MIMAT0022111 |
| Description | Phaeodactylum tricornutum pti-miR5478 mature miRNA |
| Sequence | 201 - GACAAAGGAAUCGAUCGUAUCG - 222 |
| Evidence |
experimental
Illumina [1] |
References
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