Accession
MI0018990
Description
Phaeodactylum tricornutum
pti-MIR5472 precursor miRNA
Sequence
uucuugucauAAAAUGUUGCGCUAGUCCAAGAgcuuuaagaugcuuaccacccuucacaucggcgugccaaauucgaucccgucgauugcuagcgaaaugaaggagcucaagcugacgagagcgaucgcacuuccucagcaucuggaaagcgucaccgauaaaugcaauauugugucuggucauacggggaguccguuacuagcucaagaaaaccauuucgucaacagaagacaacacuacgauucaaucgcaagcuuaaacaacgcagguauucaauuugccgaguccucuaggaugagugccgcauuacagugcuuccg
............(((((.(((((.((((.(((((((...(((((((.(((.((((((..(((.(..((.....(((((...)))))..))..))))..)))))).......(((((.(((.((....))..))).)))))...))).)))))))......(((((.....(((.(.(((((...((((.....)))).)))))).)))......))))).(((.......))).......((((...))))...((.........)).((((.......)))))))..)))).)))).))))).)))))............
............(((((.(((((.((((.(((((((...(((((((.(((.((((((..(((.(..((.....(((((...)))))..))..))))..)))))).......(((((.(((.((....))..))).)))))...))).)))))))......(((((.....(((.(.(((((...((((.....)))).)))))).)))......))))).(((.......))).......((((...))))...((.........)).((((.......)))))))..)))).)))).))))).)))))............
Structure
uucuugucauAA U A A -- ------------------------------------------------------------------------------------------------------------------------------uaa a --------------------------------------c ca g gu caaau c
AAUGU GCGCU GUCC AGAg cuu gaugcuu cca ccuuca ucg c gc ucgau
||||| ||||| |||| |||| ||| ||||||| ||| |||||| ||| | || ||||| c
uuacg cguga uagg ucuc gag cugcgaa ggu ggaagu agc g cg agcug
gccuucgugaca c g a cu ccguuuaacuuauggacgcaacaaauucgaacgcuaacuuagcaucacaacagaagacaacugcuuuaccaaaagaacucgaucauugccugaggggcauacuggucuguguuauaacguaaauagcca a cuacgacuccuucacgcuagcgagagcagucgaacucga aa - au ---uu c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000613.1: 761305-761625 [-]
Database links
Mature pti-miR5472
| Accession | MIMAT0022105 |
| Description | Phaeodactylum tricornutum pti-miR5472 mature miRNA |
| Sequence | 11 - AAAAUGUUGCGCUAGUCCAAGA - 32 |
| Evidence |
experimental
Illumina [1] |
References
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