Stem-loop aca-mir-5426

Accession

MI0018929

Description

Anolis carolinensis aca-mir-5426 precursor miRNA

Sequence

gcagugcagaugCACUCUAAGUCUACUUCCACAGucuucacuucaugcaucUGAGGAAGUAAACUUGGACUacaaaugcauacg
...(((((..((...(((((((.(((((((.(((................))).))))))).)))))))...))..)))))...

Structure

gca     ga  CAC       C       A   ucuucac 
   gugca  ug   UCUAAGU UACUUCC CAG       u
   |||||  ||   ||||||| ||||||| |||        
   uacgu  ac   AGGUUCA AUGAAGG GUc       u
gca     aa  aUC       A       A   uacguac 

Annotation confidence Not enough data

Genome context

chr3: 195203192-195203275 [+]

Mature aca-miR-5426-5p

• Accession: MIMAT0022046
• Description: Anolis carolinensis aca-miR-5426-5p mature miRNA
• Sequence: 13 - CACUCUAAGUCUACUUCCACAG - 34
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5426-3p

• Accession: MIMAT0022047
• Description: Anolis carolinensis aca-miR-5426-3p mature miRNA
• Sequence: 52 - UGAGGAAGUAAACUUGGACU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107