Stem-loop aca-mir-727

Accession

MI0018886

Description

Anolis carolinensis aca-mir-727 precursor miRNA

Sequence

uugcccuguaugucauuuUCAGUCUUCAAUUCCUCCCAgcccguuaaauggaaaaggugaGUUGAGGCGAGUUGAAGACUaaaaaugcugugcagauuca
.....(((((((.((((((.((((((((((((..((((((((.((........)).).).)))).)).)))))))))))).)))))).))))))).....

Structure

uugcc       u      C            CU  -    - - g  aaa 
     cuguaug cauuuU AGUCUUCAAUUC  CC CAgc c c uu   u
     ||||||| |||||| ||||||||||||  || |||| | | ||    
     gacgugu guaaaa UCAGAAGUUGAG  GG GUUG g g aa   g
acuua       c      a            -C  A    a u g  aag 

Annotation confidence Not enough data

Genome context

chr3: 28511667-28511766 [+]

Mature aca-miR-727-5p

• Accession: MIMAT0021987
• Description: Anolis carolinensis aca-miR-727-5p mature miRNA
• Sequence: 19 - UCAGUCUUCAAUUCCUCCCA - 38
• Evidence: experimental ; Illumina [1]

Mature aca-miR-727-3p

• Accession: MIMAT0021988
• Description: Anolis carolinensis aca-miR-727-3p mature miRNA
• Sequence: 61 - GUUGAGGCGAGUUGAAGACU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107