miRBase entry: aca-mir-34a

Stem-loop aca-mir-34a

Accession

MI0018857

Description

Anolis carolinensis aca-mir-34a precursor miRNA

Sequence

uugccAGGCAGUGUAGUUAGCUGAUUGacgaggcaacaGUCACUAACAACACGGCCAGGUga
(((((.(((.((((.(((((.((((((.........))))))))))).)))).))).)))))

Structure

     A   A    A     C      acg 
uugcc GGC GUGU GUUAG UGAUUG   a
||||| ||| |||| ||||| ||||||   g
agUGG CCG CACA CAAUC ACUGac   g
     A   G    A     -      aac

Annotation confidence Not enough data

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Genome context

GL343521.1: 196050-196111 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-34a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-miR-34a-5p

Accession	MIMAT0021939
Description	Anolis carolinensis aca-miR-34a-5p mature miRNA
Sequence	6 - AGGCAGUGUAGUUAGCUGAUUG - 27
Evidence	experimental Illumina [1]

Mature aca-miR-34a-3p

Accession	MIMAT0021940
Description	Anolis carolinensis aca-miR-34a-3p mature miRNA
Sequence	39 - GUCACUAACAACACGGCCAGGU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 21775315
MicroRNAs support a turtle + lizard clade
"Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
"Biol Lett (2012) 8:104-107