Stem-loop aca-mir-33-2

Accession

MI0018855

Description

Anolis carolinensis aca-mir-33-2 precursor miRNA

Sequence

agcucaaguggcaguuucggggGUGCAUUGUAGUUGCAUUGCAuguguggccaagcugugCAAUGCCCCUCCAGUGCAGCCcugaggccguccucuaccagc
.(((..((.(((.(((((((((.(((((((.((..((((((((((.((......))))))))))))..)).))))))).))))))))).).)).))...)))

Structure

a   -ca  u  - a         G       U  UU          u  gg 
 gcu   ag gg c guuucgggg UGCAUUG AG  GCAUUGCAug gu  c
 |||   || || | ||||||||| ||||||| ||  |||||||||| ||   
 cga   uc cc g cggagucCC ACGUGAC UC  CGUAACgugu cg  c
-   cca  u  u c         G       C  CC          -  aa 

Annotation confidence Not enough data

Genome context

GL343500.1: 19219-19320 [+]

Mature aca-miR-33-5p

• Accession: MIMAT0021934
• Description: Anolis carolinensis aca-miR-33-5p mature miRNA
• Sequence: 23 - GUGCAUUGUAGUUGCAUUGCA - 43
• Evidence: experimental ; Illumina [1]

Mature aca-miR-33-2-3p

• Accession: MIMAT0021936
• Description: Anolis carolinensis aca-miR-33-2-3p mature miRNA
• Sequence: 61 - CAAUGCCCCUCCAGUGCAGCC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107