Stem-loop aca-mir-29b-2

Accession

MI0018843

Description

Anolis carolinensis aca-mir-29b-2 precursor miRNA

Sequence

cuggagcucccucaggaagcugguuucauauggugguuuagauuuaaguacacaaugucUAGCACCAUUUGAAAUCAGUGcucuuggaggaagaauggca
.......(((.((((((.((((((((((.((((((..((((((.............)))))))))))).))))))))))..)))))).))).........

Structure

--cuggagc   c      -a          u      gu      uuaag 
         ucc ucagga  gcugguuuca auggug  uuagau     u
         ||| ||||||  |||||||||| ||||||  ||||||     a
         agg gguucu  UGACUAAAGU UACCAC  GAUcug     c
acgguaaga   a      cG          U      --      uaaca 

Annotation confidence Not enough data

Genome context

chr5: 1037450-1037549 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-29b-2

Mature aca-miR-29b

• Accession: MIMAT0021914
• Description: Anolis carolinensis aca-miR-29b mature miRNA
• Sequence: 60 - UAGCACCAUUUGAAAUCAGUG - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107