Stem-loop aca-mir-216b

Accession

MI0018820

Description

Anolis carolinensis aca-mir-216b precursor miRNA

Sequence

ucaaagucacagacugagAAAUCUCUGCAGGCAAAUGUGAugucuugaccagcaaucucACAGUUACCAGCAGAGGUUCUgcaaucuggacugcu
....((((.((((.((((((.(((((((.((....((((((((........)))...)))))....)).))))))))))).)).))))))))...

Structure

ucaa    a    c  -    A       A  CAAA     ---   cuu 
    aguc caga ug agAA UCUCUGC GG    UGUGA   ugu   g
    |||| |||| || |||| ||||||| ||    |||||   |||    
    ucag gucu ac UCUU GGAGACG CC    ACAcu   acg   a
-ucg    -    a  g    -       A  AUUG     cua   acc 

Annotation confidence Not enough data

Genome context

chr1: 256248873-256248967 [-]

Mature aca-miR-216b-5p

• Accession: MIMAT0021876
• Description: Anolis carolinensis aca-miR-216b-5p mature miRNA
• Sequence: 19 - AAAUCUCUGCAGGCAAAUGUGA - 40
• Evidence: experimental ; Illumina [1]

Mature aca-miR-216b-3p

• Accession: MIMAT0021877
• Description: Anolis carolinensis aca-miR-216b-3p mature miRNA
• Sequence: 60 - ACAGUUACCAGCAGAGGUUCU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107