Stem-loop aca-mir-1805

Accession

MI0018774

Description

Anolis carolinensis aca-mir-1805 precursor miRNA

Sequence

ggaacauucuaggAGUUGUAGUCUUUCAAACAGAGcuuugcaaguacauaccUGUAUUGGAACACUACAGCUCCaggaacuuuc
((((..((((.(((((((((((.((((((((((..................)))).)))))).)))))))))))))))..))))

Structure

    ca    a           C      -    AGcuuugc 
ggaa  uucu ggAGUUGUAGU UUUCAA ACAG        a
||||  |||| ||||||||||| |||||| ||||         
cuuu  agga CCUCGACAUCA AAGGUU UGUc        a
    ca    -           C      A    cauacaug 

Annotation confidence Not enough data

Genome context

chr3: 110979898-110979981 [+]

Mature aca-miR-1805-5p

• Accession: MIMAT0021807
• Description: Anolis carolinensis aca-miR-1805-5p mature miRNA
• Sequence: 14 - AGUUGUAGUCUUUCAAACAGAG - 35
• Evidence: experimental ; Illumina [1]

Mature aca-miR-1805-3p

• Accession: MIMAT0021808
• Description: Anolis carolinensis aca-miR-1805-3p mature miRNA
• Sequence: 53 - UGUAUUGGAACACUACAGCUCC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107