Stem-loop aca-mir-129b

Accession

MI0018731

Description

Anolis carolinensis aca-mir-129b precursor miRNA

Sequence

cagggucuucccuggguCUUUUUGCGGUCUGGGCUUUcugggucuguccaacccccguaucagaAAGCCCUUACCCCAAAAAGCAuccggggcuggacgagggcaucgccgcga
....((((.(((((((((((((((.(((..(((((((((((..(.(........).)..)))))))))))..))).))))))).))))))))..))))...(((...)))....

Structure

------------cagg    -u        -       C   CU           gu u ucc 
                gucu  cccugggu CUUUUUG GGU  GGGCUUUcugg  c g   a
                ||||  |||||||| ||||||| |||  |||||||||||  | |    
                cagg  ggggccuA GAAAAAC CCA  CCCGAAagacu  g c   a
agcgccgcuacgggag    uc        C       C   UU           au c ccc 

Annotation confidence Not enough data

Genome context

chr6: 79191950-79192063 [-]

Mature aca-miR-129b-5p

• Accession: MIMAT0021736
• Description: Anolis carolinensis aca-miR-129b-5p mature miRNA
• Sequence: 18 - CUUUUUGCGGUCUGGGCUUU - 37
• Evidence: experimental ; Illumina [1]

Mature aca-miR-129b-3p

• Accession: MIMAT0021737
• Description: Anolis carolinensis aca-miR-129b-3p mature miRNA
• Sequence: 65 - AAGCCCUUACCCCAAAAAGCA - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107