miRBase entry: aca-let-7i

Stem-loop aca-let-7i


Accession
MI0018710
Description
Anolis carolinensis aca-let-7i precursor miRNA

Literature search
1 open access papers mention aca-let-7i
(1 sentences)

Sequence

gcaccacggcccuggcUGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUGCUAgugcuggugaugaucgg
.(((((..((.(((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))).)))))))........

Structure
-------g     cg  c     U                 U   --------  u     ugu 
        cacca  gc cuggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
        |||||  || ||||| ||||||||||||||||| |||        || |||||   a
        guggu  cg gAUCG UUCCGUCAUCGAACGCG Caa        uc gcccg   c
ggcuagua     --  u     -                 U   uagaggug  -     uua 


Annotation confidence Not enough data
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Genome context
chr5: 51075540-51075651 [-]

Database links

Mature aca-let-7i-5p

Accession MIMAT0021707
Description Anolis carolinensis aca-let-7i-5p mature miRNA
Sequence 17 - UGAGGUAGUAGUUUGUGCUGUU - 38
Evidence experimental
Illumina [1]

Mature aca-let-7i-3p

Accession MIMAT0021708
Description Anolis carolinensis aca-let-7i-3p mature miRNA
Sequence 73 - CUGCGCAAGCUACUGCCUUGCUA - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107