Stem-loop gma-MIR167j

Accession

MI0018686

Description

Glycine max gma-MIR167j precursor miRNA

Literature search

27 open access papers mention gma-MIR167j
(183 sentences)

Sequence

13503422 reads, 26653.0 reads per million, 177 experiments

cagcaguUGAAGCUGCCAGCAUGAUCUGaguuuaccuucuauugguaagaacaGAUCAUGUGGCUGCUUCACCuguug
((((((.((((((.((((.(((((((((..((((((.......))))))..))))))))))))).)))))).))))))

Structure

      u      U    G         ag      uu 
cagcag UGAAGC GCCA CAUGAUCUG  uuuacc  c
|||||| |||||| |||| |||||||||  ||||||  u
guuguC ACUUCG CGGU GUACUAGac  gaaugg  a
      C      U    -         aa      uu 

Annotation confidence High

Genome context

chr20: 45890458-45890535 [+]

Mature gma-miR167j-5p

• Accession: MIMAT0021677
• Description: Glycine max gma-miR167j-5p mature miRNA
• Sequence: 8 - UGAAGCUGCCAGCAUGAUCUG - 28
• Evidence: experimental ; Illumina [1]

Mature gma-miR167j-3p

• Accession: MIMAT0054263
• Description: Glycine max gma-miR167j-3p mature miRNA
• Sequence: 54 - GAUCAUGUGGCUGCUUCACC - 73
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307