Stem-loop gma-MIR319l

Accession

MI0018677

Description

Glycine max gma-MIR319l precursor miRNA

Literature search

18 open access papers mention gma-MIR319l
(44 sentences)

Sequence

32488196 reads, 101579.0 reads per million, 178 experiments

ugaaaggugcagaaauagGAGUUCCCUUGCAGCCCAAAACacccugcaugaacuacuucauguuguuUUGGACUGAAGGGAGCUCCUUCuucuucacuuuca
((((((.((.((((..((((((((((((.(((.((((((((....(((((((....))))))))))))))).)))))))))))))))..)))).))))))))

Structure

      g  c    au            G   C        cccu       c 
ugaaag ug agaa  agGAGUUCCCUU CAG CCAAAACa    gcaugaa u
|||||| || ||||  |||||||||||| ||| ||||||||    |||||||  
acuuuc ac ucuu  UCCUCGAGGGAA GUC GGUUuugu    uguacuu a
      -  u    CU            -   A        ----       c 

Annotation confidence High

Genome context

chr17: 9165413-9165514 [-]

Mature gma-miR319l-5p

• Accession: MIMAT0054258
• Description: Glycine max gma-miR319l-5p mature miRNA
• Sequence: 19 - GAGUUCCCUUGCAGCCCAAAAC - 40
• Evidence: experimental ; unknown

Mature gma-miR319l-3p

• Accession: MIMAT0021666
• Description: Glycine max gma-miR319l-3p mature miRNA
• Sequence: 68 - UUGGACUGAAGGGAGCUCCUUC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307