Stem-loop gma-MIR156n

Accession

MI0018655

Description

Glycine max gma-MIR156n precursor miRNA

Literature search

39 open access papers mention gma-MIR156n
(155 sentences)

Sequence

1271310 reads, 2789.0 reads per million, 178 experiments

aaaUUGACAGAAGAGAGUGAGCACaaagaggcacuugauauaauucuauaucacugcuuuuguguGCUCACCACUCUUUCUGUCGGUuu
(((((((((((((((.(((((((((.(((((((..(((((((....))))))).))))))).)))))))))..))).))))))))))))

Structure

            -   -A         a       cu       a 
aaaUUGACAGAA GAG  GUGAGCACa agaggca  ugauaua u
|||||||||||| |||  ||||||||| |||||||  |||||||  
uuUGGCUGUCUU CUC  CACUCGugu uuuucgu  acuauau u
            U   AC         g       -c       c 

Annotation confidence High

Genome context

chr14: 10456738-10456826 [-]

Mature gma-miR156n-5p

• Accession: MIMAT0021638
• Description: Glycine max gma-miR156n-5p mature miRNA
• Sequence: 4 - UUGACAGAAGAGAGUGAGCAC - 24
• Evidence: experimental ; Illumina [1-2]

Mature gma-miR156n-3p

• Accession: MIMAT0054246
• Description: Glycine max gma-miR156n-3p mature miRNA
• Sequence: 66 - GCUCACCACUCUUUCUGUCGGU - 87
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153