Stem-loop gma-MIR156l

Accession

MI0018653

Description

Glycine max gma-MIR156l precursor miRNA

Literature search

39 open access papers mention gma-MIR156l
(155 sentences)

Sequence

337537 reads, 886.0 reads per million, 178 experiments

gguaagguugUUGACAGAAGAUAGAGAGCACagaugaugauaugcacauauacauggaacaggaauuuaagcaauugcaucucacuccuuuguGCUCUCUAAGCUUCUGUCAUccaccucc
....((((.(.(((((((((.(((((((((((((.(((((.(((((.............................))))).))).)).)))))))))))))..))))))))).).))))..

Structure

ggua    u U         -A             u  -   u     cauauacauggaa 
    aggu g UGACAGAAG  UAGAGAGCACaga ga uga augca             c
    |||| | |||||||||  ||||||||||||| || ||| |||||             a
    ucca c ACUGUCUUC  AUCUCUCGuguuu cu acu uacgu             g
--cc    c U         GA             c  c   c     uaacgaauuuaag 

Annotation confidence High

Genome context

chr7: 9384146-9384266 [+]

Mature gma-miR156l-5p

• Accession: MIMAT0021636
• Description: Glycine max gma-miR156l-5p mature miRNA
• Sequence: 11 - UUGACAGAAGAUAGAGAGCAC - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR156l-3p

• Accession: MIMAT0054244
• Description: Glycine max gma-miR156l-3p mature miRNA
• Sequence: 94 - GCUCUCUAAGCUUCUGUCAU - 113
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307