Stem-loop gma-MIR156k

Accession

MI0018652

Description

Glycine max gma-MIR156k precursor miRNA

Literature search

40 open access papers mention gma-MIR156k
(156 sentences)

Sequence

1879079 reads, 4129.0 reads per million, 178 experiments

gaaaUUGACAGAAGAGAGUGAGCACacagaggcacuugguauaguauauauacuauugcuuuugcgUGCUCACUUCUCUUUCUGUCAACUuc
(((.(((((((((((((((((((((.((((((((..(((((((.....))))))).)))))))).)))))))).)))).))))))))).)))

Structure

   a         -    -        a        cu       g 
gaa UUGACAGAA GAGA GUGAGCAC cagaggca  ugguaua u
||| ||||||||| |||| |||||||| ||||||||  ||||||| a
cuU AACUGUCUU CUCU CACUCGUg guuuucgu  aucauau u
   C         U    U        c        -u       a 

Annotation confidence High

Genome context

chr6: 4705086-4705177 [-]

Mature gma-miR156k-5p

• Accession: MIMAT0021635
• Description: Glycine max gma-miR156k-5p mature miRNA
• Sequence: 5 - UUGACAGAAGAGAGUGAGCAC - 25
• Evidence: experimental ; Illumina [1-2]

Mature gma-miR156k-3p

• Accession: MIMAT0054243
• Description: Glycine max gma-miR156k-3p mature miRNA
• Sequence: 67 - UGCUCACUUCUCUUUCUGUCAACU - 90
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153