Stem-loop gma-MIR395c

Accession

MI0018644

Description

Glycine max gma-MIR395c precursor miRNA

Literature search

15 open access papers mention gma-MIR395c
(68 sentences)

Sequence

139527 reads, 348.0 reads per million, 165 experiments

ccuagaGUUCCCCUUAAUGCUUCAUUGaggauucuguuuagguccaauuuaacuagucccuacUGAAGUGUUUGGGGGAACUCCggg
(((.((((((((((.(((((((((.((.(((((..(((.((......)).))).))))).)).))))))))).)))))))))).)))

Structure

   a          U         U  a     cu   u  gu 
ccu gaGUUCCCCU AAUGCUUCA UG ggauu  guu ag  c
||| |||||||||| ||||||||| || |||||  ||| ||   
ggg CUCAAGGGGG UUGUGAAGU au ccuga  caa uu  c
   C          U         c  c     -u   u  aa 

Annotation confidence High

Genome context

chr8: 41475132-41475218 [+]

Mature gma-miR395c-5p

• Accession: MIMAT0054239
• Description: Glycine max gma-miR395c-5p mature miRNA
• Sequence: 7 - GUUCCCCUUAAUGCUUCAUUG - 27
• Evidence: experimental ; unknown

Mature gma-miR395c-3p

• Accession: MIMAT0021626
• Description: Glycine max gma-miR395c-3p mature miRNA
• Sequence: 64 - UGAAGUGUUUGGGGGAACUCC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307