Stem-loop gma-MIR395b

Accession

MI0018643

Description

Glycine max gma-MIR395b precursor miRNA

Literature search

16 open access papers mention gma-MIR395b
(69 sentences)

Sequence

141954 reads, 369.0 reads per million, 165 experiments

ucccuagagUUUCCCUGAACACUUCAUUAaagggcuuuauugaaauauaauccaaaguuagucuauaCUGAAGUGUUUGGGGGAACUCcugguga
((((..((((((((((((((((((((.((..(((((...(((..........)))....))))).)).))))))))))))))))))))..)).))

Structure

  -  ua                    U  aa     -uua   aaau 
uc cc  gagUUUCCCUGAACACUUCA UA  gggcu    uug    a
|| ||  |||||||||||||||||||| ||  |||||    |||     
ag gg  CUCAAGGGGGUUUGUGAAGU au  ucuga    aac    u
  u  uc                    C  -a     uuga   cuaa 

Annotation confidence High

Genome context

chr2: 1747330-1747424 [-]

Mature gma-miR395b-5p

• Accession: MIMAT0054238
• Description: Glycine max gma-miR395b-5p mature miRNA
• Sequence: 10 - UUUCCCUGAACACUUCAUUA - 29
• Evidence: experimental ; unknown

Mature gma-miR395b-3p

• Accession: MIMAT0021625
• Description: Glycine max gma-miR395b-3p mature miRNA
• Sequence: 68 - CUGAAGUGUUUGGGGGAACUC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307